Data for: "Toward quantitative low-energy ion scattering on CaSiO3 from comparison to multiple-scattering-resolved dynamical binary collision approximation simulations"
Contributors
Description
Contents of this data set
This repository contains the raw experimental and simulation data as well as the evaluation scripts to reproduce the figures published in "Toward quantitative low-energy ion scattering on CaSiO3 from comparison to multiple-scattering-resolved dynamical binary collision approximation simulations". Experimentally measured LEIS spectra from He ions scattered off CaSiO3 at various energies were fitted by a superposition of simulated partial spectra obtained from the IMINTDYN code.
Raw data and simulations
- Directories
240418 LEIS Xe Messungenand240808 Calibrationcontain the raw experimental data from the ionTOF Qtac instrument at CEST in Wiener Neustadt. The former hosts data for Au, Si and CaSiO3 samples, while the latter contains data from an RBS calibration sample. All files in there are plain text. Files named*.properties.txtgive the machine details used to obtain the spectra. - The directory
240610_a IMINTDYNcontains the IMINTDYN simulations (both input and output) for samples of pure Au, Si and N, as well as wollastonite in its pristine form (CaSiO3) and in the sputter cleaning equilibrium (CaSiOx). SDTrimSP_1_keV_Xe_Wo_dyn_no_ret_discretisation_parallelcontains an SDTrimSP simulations of the sputter cleaning of CaSiO3 (both input and output), the results of which served as compositional input for the IMINTDYN simulations of the LEIS spectra.
Fitting and analysis
- All the evaluation and plotting routines were written for and run in python, version 3.10.12. The necessary libraries, including the used versions, are summarised in
requirements.txtand can be installed viapip install -r requirements.txt. functions.pyprovides useful functions for reading and handling the experimental and simulated spectra in the above directories. Its functions are called from within the following jupyter notebooks.01_fitting.ipynbperforms the fitting routines and saves the results (fit parameters, reports on fit statistics as well as graphical overviews of the fits) in the directoriesFit_ResultsandResults_Overview. Some results are grouped in python dictionary objects. They are pickled and saved as binary*.pklfiles, which need to be unpickled to be opened. Where necessary, this takes place in the following notebooks.02_data_evaluation.ipynbreads in the results from01_fitting.ipynband performs statistical evaluations. The resulting plots are figures as presented in the manuscript and saved to thePlotsdirectory.03_energy_calibration.ipynbcompares simulated and experimental LEIS spectra peak positions for the calibration samples to verify that the detector is well calibrated. The result is Figure 7 from the Appendix to the paper.04_fitting_for_calibration.ipynbperforms the same fitting routines as for the wollastonite sample, but for a Si sample as a validation. It results in Fig. 8 of the paper, showing the matrix effects for LEIS depending on the different matrices that the Si is embedded in.
Plotting and figures
- In addition to the above,
PRB.mplstyleis a plain text file defining some parameters used by matplotlib to ensure a consistent style across all figures. PRB.mplstylehas set the propertytext.usetex:True. Therefore, text will be rendered using LaTeX in matplotlib, and some string make use of this and use LaTeX syntax. For this to work, a LaTeX distribution is necessary. Alternatively, change the line totext.usetex:Falseto resort to matplotlib's default text handling.
Data is licensed under the CC BY license, while the MIT license applies to the software.
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Additional details
Related works
- Is part of
- Publication: 10.1103/3ks5-1c83 (DOI)
- Preprint: arXiv:2311.10604 (arXiv)
Funding
- FWF Austrian Science Fund
- Ion Impacts in Real-Time (time4ions) Y1174
- FWF Austrian Science Fund
- Magnetic Surface States Probed by Highly Charged Ions I4914
- FWF Austrian Science Fund
- Time-dependent neutralization of highly charged ions P36264
- Government of Lower Austria
- Austrian Academy of Sciences
- National Aeronautics and Space Administration
- 80NSSC24M0084